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Geis, M. Flamm, Christoph ... |
2008 |
Folding Kinetics of Large RNAs |
Paper |
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Heine, Christian Scheuermann, Gerik... |
2007 |
Visualization of Barrier Tree Sequences Revisited. |
Paper |
pdf |
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Heine, Christian Scheuermann, Gerik... |
2006 |
Visualization of Barrier Tree Sequences. |
Paper |
pdf |
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Kapranov, Philipp Chen, Julian L. ... |
2007 |
RNA maps reveal new RNA classes and a possible function for pervasive transcription |
Paper |
pdf |
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Gruber, Andreas R. Kilgus, Carsten... |
2008 |
Arthropod 7SK RNA |
Paper |
pdf |
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Jöchl, Christoph Rederstorff, Mathieu... |
2008 |
Small ncRNA transcriptome analysis from Aspergillus fumigatus suggests a novel mechanism for regulation of protein-synthesis |
Paper |
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Seemann, Stefan E. Gilchrist, Michael J... |
2007 |
Detection of RNA structures in porcine EST data and related mammals |
Paper |
pdf |
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Gruber, Andreas R. Koper-Emde, Dorota... |
2008 |
Invertebrate 7SK snRNAs |
Paper |
pdf |
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Hertel, Jana Hofacker, Ivo L. ... |
2008 |
SnoReport: Computational identification of snoRNAs with unknown targets |
Paper |
pdf |
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Bompfünewerer, Athanasius F. Backofen,... |
2008 |
Variations on RNA Folding and Alignment: Lessons from Benasque |
Paper |
pdf |
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Hofacker, Ivo L. Stadler, Peter F. |
2007 |
RNA Secondary Structure |
Paper |
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Will, Sebastian Missal, Kristin ... |
2007 |
Inferring Non-Coding RNA Families and Classes by Means of Structure-Based Clustering |
Paper |
pdf |
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Bompfünewerer, Athanasius F. Backofen,... |
2007 |
RNAs Everywhere: Genome-Wide Annotation of Structured RNAs |
Paper |
pdf |
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Mosig, Axel Hofacker, Ivo L. ... |
2006 |
Comparative Analysis of Cyclic Sequences: Viroids and other Small Circular RNAs |
Paper |
pdf |
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Wolfinger, Michael T. Will, Sebastian... |
2006 |
Exploring the Lower Part of Discrete Polymer Model Energy Landscapes |
Paper |
pdf |
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Bernhart, Stephan Hofacker, Ivo L.... |
2006 |
Local RNA Base Pairing Probabilities in Large Sequences |
Paper |
pdf |
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Hofacker, Ivo L. Stadler, Peter F. |
2006 |
Memory Efficient Folding Algorithms for Circular RNA Secondary Structures |
Paper |
pdf |
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Forst, Christian V. Flamm, Christoph... |
2006 |
Algebraic Comparison of Metabolic Networks, Phylogenetic Inference, and Metabolic Innovation |
Paper |
pdf |
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Hofacker, Ivo L. Stadler, Peter F. |
2006 |
Modeling RNA Folding |
Paper |
pdf |
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Böhmdorfer, Gudrun Hofacker, Ivo L.... |
2005 |
Unorthodox mRNA start site to extend the highly structured leader of retrotransposon Tto1 mRNA increases transposition rate |
Paper |
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Washietl, Stefan Hofacker, Ivo L. ... |
2005 |
Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome |
Paper |
pdf |
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Stocsits, Roman Hofacker, Ivo L. ... |
2005 |
Multiple Sequence Alignments of Partially Coding Nucleic Acid Sequences |
Paper |
pdf |
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Washietl, Stefan Hofacker, Ivo L. ... |
2005 |
Fast and reliable prediction of noncoding RNAs |
Paper |
pdf |
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Bompfünewerer, Athanasius F. Flamm,... |
2005 |
Evolutionary Patterns of Non-Coding RNAs |
Paper |
pdf |
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Flamm, Christoph Hofacker, Ivo L. ... |
2004 |
RNA Folding in silico |
Paper |
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Thurner, Caroline Hofacker, Ivo L.... |
2004 |
Conserved RNA Pseudoknots |
Paper |
pdf |
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Binder, Hans Kirsten, Toralf ... |
2004 |
Interactions in oligonucleotide hybrid duplexes on microarrays |
Paper |
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Witwer, Christina Hofacker, Ivo L.... |
2004 |
Prediction of Consensus RNA Secondary Structures Including Pseudoknots |
Paper |
pdf |
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Hofacker, Ivo L. Stadler, Peter F. |
2004 |
The Partition Function Variant of Sankoff's Algorithm |
Paper |
pdf |
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Flamm, Christoph Hofacker, Ivo L. ... |
2004 |
Computational Chemistry with RNA Secondary Structures |
Paper |
pdf |
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Wolfinger, Michael T. Flamm, W. ... |
2004 |
Exact Folding Dynamics of RNA Secondary Structures |
Paper |
pdf |
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Hofacker, Ivo L. Bernhart, Stephan... |
2004 |
Alignment of RNA Base Pairing Probability Matrices |
Paper |
pdf |
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Copeland, Claudia S. Heyers, Oliver... |
2004 |
Structural and evolutionary analysis of the transcribed sequence of Boudicca, a Schistosoma mansoni retrotransposon |
Paper |
pdf |
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Hofacker, Ivo L. Stadler, Peter F.... |
2004 |
Conserved RNA Secondary Structures in Viral Genomes: A Survey |
Paper |
pdf |
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Thurner, Caroline Witwer, Christina... |
2004 |
Conserved RNA Secondary Structures in Flaviviridae Genomes |
Paper |
pdf |
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Hofacker, Ivo L. Priwitzer, Barbara... |
2004 |
Prediction of Locally Stable RNA Secondary Structures for Genome-Wide Surveys |
Paper |
pdf |
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Weberndorfer, G. Hofacker, Ivo L. ... |
2003 |
On the Evolution of Primitive Genetic Codes |
Paper |
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Hertel, Jana Lindemeyer, Manuela ... |
2006 |
The Expansion of the Metazoan MicroRNA Repertoire |
Paper |
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Washietl, Stefan Pedersen, Jakob S.... |
2007 |
Structured RNAs in the ENCODE Selected Regions of the Human Genome |
Paper |
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Mückstein, Ulrike Tafer, Hakim ... |
2008 |
Translational Control by RNA-RNA Interaction: Improved Computation of RNA-RNA Binding Thermodynamics |
Paper |
pdf |
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Hsu, Wei-Che Huang, Hsien-Da ... |
2006 |
miRNAMap: Genomic Maps of MicroRNA Genes and Their Target Genes in Mammalian Genomes |
Paper |
pdf |
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Bernhart, Stephan Tafer, Hakim ... |
2006 |
Partition Function and Base Pairing Probabilities of RNA Heterodimers |
Paper |
pdf |
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Mückstein, Ulrike Tafer, Hakim ... |
2006 |
Thermodynamics of RNA-RNA Binding |
Paper |
pdf |
